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    SNARE associated Golgi protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832026, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SNARE associated Golgi protein family
    Primary source
    TAIR:AT5G19070
    Locus tag
    AT5G19070
    See related
    Araport:AT5G19070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16G12.110; T16G12_110
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (6375159..6377667)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene cytochrome P450 family protein Neighboring gene RING/U-box superfamily protein Neighboring gene Heavy metal transport/detoxification superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343586.1
    NM_121912.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SNARE associated Golgi protein family
    NP_197408.2
    • SNARE associated Golgi protein family; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G03260.1); Has 4755 Blast hits to 4755 proteins in 1226 species: Archae - 31; Bacteria - 3179; Metazoa - 263; Fungi - 112; Plants - 295; Viruses - 0; Other Eukaryotes - 875 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6375159..6377667
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121912.3 → NP_197408.2  SNARE associated Golgi protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197408.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y635, A0A654G2D9, Q6DBQ2
      Conserved Domains (1) summary
      COG0398
      Location:8 → 188
      TVP38; Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain [Function unknown]

    2. NM_001343586.1 → NP_001331805.1  SNARE associated Golgi protein family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BF13
    Nucleotide Protein
    Heading Accession and Version

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