U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Phosphoglycerate mutase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836405, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Phosphoglycerate mutase family protein
    Primary source
    TAIR:AT5G62840
    Locus tag
    AT5G62840
    See related
    Araport:AT5G62840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MQB2.16; MQB2_16
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (25228139..25229738, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene peroxin 14 Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene Nodulin MtN3 family protein Neighboring gene ncRNA Neighboring gene F-box associated ubiquitination effector family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001345562.1
    NM_125679.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Phosphoglycerate mutase family protein
    NP_201090.1
    • Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Twin-arginine translocation pathway, signal sequence (InterPro:IPR006311); Has 111 Blast hits to 111 proteins in 37 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25228139..25229738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125679.2 → NP_201090.1  Phosphoglycerate mutase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201090.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQ29, A0A5S9YIP8, Q9FM11
      Conserved Domains (1) summary
      smart00855
      Location:79 → 238
      PGAM; Phosphoglycerate mutase family

    2. NM_001345562.1 → NP_001331585.1  Phosphoglycerate mutase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BEB7, A0A7G2FM94
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.