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    UGT78D2 UDP-glucosyl transferase 78D2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831568, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UGT78D2
    Official Full Name
    UDP-glucosyl transferase 78D2
    Primary source
    TAIR:AT5G17050
    Locus tag
    AT5G17050
    See related
    Araport:AT5G17050
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2K13.200; F2K13_200; UDP-glucosyl transferase 78D2
    Summary
    The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.
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    Genomic context

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    See UGT78D2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (5607788..5609589, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene UDP-glucosyl transferase 78D3 Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene ADP-ribosylation factor B1B Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Glycoside-specific metabolomics combined with precursor isotopic labeling for characterizing plant glycosyltransferases. Wu J, et al. Mol Plant, 2022 Oct 3. PMID 35996753
    2. Anthocyaninless1 gene of Arabidopsis thaliana encodes a UDP-glucose:flavonoid-3-O-glucosyltransferase. Kubo H, et al. J Plant Res, 2007 May. PMID 17277900
    3. Engineering flavonoid glycosyltransferases for enhanced catalytic efficiency and extended sugar-donor selectivity. Kim HS, et al. Planta, 2013 Oct. PMID 23801300
    4. Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor. Tohge T, et al. Plant J, 2005 Apr. PMID 15807784
    5. The activity of Arabidopsis glycosyltransferases toward salicylic acid, 4-hydroxybenzoic acid, and other benzoates. Lim EK, et al. J Biol Chem, 2002 Jan 4. PMID 11641410

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. First report on the construction of fusion proteins with expanded sugar-donor range and enhanced catalytic efficiencies for sugar donors.
      Title: Engineering flavonoid glycosyltransferases for enhanced catalytic efficiency and extended sugar-donor selectivity.
    2. ANL1 gene encodes UDP-glucose:flavonoid-3-O-glucosyltransferase and is expressed in all tissues examined, including rosette leaves, stems, flower buds and roots. Anthocyaninless1] [ANL1]
      Title: Anthocyaninless1 gene of Arabidopsis thaliana encodes a UDP-glucose:flavonoid-3-O-glucosyltransferase.
    3. Two putative glycosyltransferase genes (At5g17050 and At4g14090) induced by PAP1 expression were confirmed to encode flavonoid 3-O-glucosyltransferase and anthocyanin 5-O-glucosyltransferase, respectively. [flavonoid 3-O-glucosyltransferase]
      Title: Functional genomics by integrated analysis of metabolome and transcriptome of Arabidopsis plants over-expressing an MYB transcription factor.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    NM_121711.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UDP-glucosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables anthocyanidin 3-O-glucosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables flavonol 3-O-glucosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables quercetin 3-O-glucosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in coumarin biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    UDP-glucosyl transferase 78D2
    NP_197207.1
    • UDP-glucosyl transferase 78D2 (UGT78D2); CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D3 (TAIR:AT5G17030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5607788..5609589 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121711.5 → NP_197207.1  UDP-glucosyl transferase 78D2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197207.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LFJ8
      UniProtKB/TrEMBL
      A0A178U9P1, A0A384L9K8, A0A654G1Q4, W8PUE7
      Conserved Domains (1) summary
      cd03784
      Location:12 → 438
      GT1_Gtf-like; UDP-glycosyltransferases and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LFJ8.1

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