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    CG6094 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34446, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6094provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032261
    Locus tag
    Dmel_CG6094
    See related
    AllianceGenome:FB:FBgn0032261
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    dICT1; Dmel\CG6094; FBgn 32261
    Summary
    Predicted to enable aminoacyl-tRNA hydrolase activity and translation release factor activity, codon nonspecific. Predicted to be involved in mitochondrial translational termination. Predicted to be located in mitochondrion. Predicted to be part of mitochondrial large ribosomal subunit. Is expressed in adult head; adult heart; dorsal pharyngeal muscle cell; embryonic/larval midgut; and larval visceral muscle cell. Orthologous to human MRPL58 (mitochondrial ribosomal protein L58). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6094 in Genome Data Viewer
    Location:
    31F4-31F4; 2-43 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10507081..10508032)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10507081..10508032)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Myosin 31DF Neighboring gene antisense RNA:CR44224 Neighboring gene uncharacterized protein Neighboring gene Fatty acid transport protein 1 Neighboring gene Leucine-rich repeat 47

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. New slbo-Gal4 driver lines for the analysis of border cell migration during Drosophila oogenesis. Ogienko AA, et al. Chromosoma, 2018 Dec. PMID 30030602
    2. Type ID unconventional myosin controls left-right asymmetry in Drosophila. Spéder P, et al. Nature, 2006 Apr 6. PMID 16598259
    3. Genome-wide RNAi screen identifies broadly-acting host factors that inhibit arbovirus infection. Yasunaga A, et al. PLoS Pathog, 2014 Feb. PMID 24550726, Free PMC Article
    4. Some novel intron positions in conserved Drosophila genes are caused by intron sliding or tandem duplication. Lehmann J, et al. BMC Evol Biol, 2010 May 26. PMID 20500887, Free PMC Article
    5. The translation factors of Drosophila melanogaster. Marygold SJ, et al. Fly (Austin), 2017 Jan 2. PMID 27494710, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables aminoacyl-tRNA hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables aminoacyl-tRNA hydrolase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables translation release factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables translation release factor activity, codon nonspecific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables translation release factor activity, codon nonspecific ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial translational termination IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mitochondrial translational termination ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in translational termination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6094-PA
    CG6094-PB
    NP_001260353.1
    NP_609416.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10507081..10508032
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273424.1 → NP_001260353.1  uncharacterized protein Dmel_CG6094, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260353.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0AQ12, A0AQ14, A0AQ18, A0AQ20, C0MKK6, C0MKL4, Q9VKU3
      Conserved Domains (1) summary
      PRK09256
      Location:65 → 200
      PRK09256; hypothetical protein; Provisional

    2. NM_135572.3 → NP_609416.1  uncharacterized protein Dmel_CG6094, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609416.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0AQ12, A0AQ14, A0AQ18, A0AQ20, C0MKK6, C0MKL4, Q9VKU3
      Related
      FBpp0079680
      Conserved Domains (1) summary
      PRK09256
      Location:65 → 200
      PRK09256; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VKU3 Q9VKU3

    Gene LinkOut

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