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    CG12768 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40513, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12768provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037206
    Locus tag
    Dmel_CG12768
    See related
    AllianceGenome:FB:FBgn0037206
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12768
    Summary
    Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. Is expressed in amnioserosa and amnioserosa primordium. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12768 in Genome Data Viewer
    Location:
    80B2-80B3; 3-47 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (22910491..22923532)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (22903591..22916632)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Brother of Yb Neighboring gene long non-coding RNA:CR45661 Neighboring gene mir-9388 stem loop Neighboring gene Mesoderm-expressed 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Krüppel-like factor Cabut has cell cycle regulatory properties similar to E2F1. Zhang P, et al. Proc Natl Acad Sci U S A, 2021 Feb 16. PMID 33558234, Free PMC Article
    2. Mes2, a MADF-containing transcription factor essential for Drosophila development. Zimmermann G, et al. Dev Dyn, 2006 Dec. PMID 17029287
    3. FISH analysis of Drosophila melanogaster heterochromatin using BACs and P elements. Corradini N, et al. Chromosoma, 2003 Jul. PMID 12827380
    4. Generation of LexA enhancer-trap lines in Drosophila by an international scholastic network. Kim ES, et al. G3 (Bethesda), 2023 Aug 30. PMID 37279923, Free PMC Article
    5. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 22912345-22912684 mobile_element_type = transposon:INE-1{}2712
    • Loc: 22915802-22916299 mobile_element_type = transposon:INE-1{}2714

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of transcription regulator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12768-PA
    CG12768-PB
    CG12768-PC
    CG12768-PD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      22910491..22923532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275302.1 → NP_001262231.1  uncharacterized protein Dmel_CG12768, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262231.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRX5, Q9VNP4
      Conserved Domains (1) summary
      smart00595
      Location:12 → 100
      MADF; subfamily of SANT domain

    2. NM_141174.3 → NP_649431.1  uncharacterized protein Dmel_CG12768, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649431.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRX5, Q9VNP4
      Related
      FBpp0078211
      Conserved Domains (1) summary
      smart00595
      Location:12 → 100
      MADF; subfamily of SANT domain

    3. NM_001275300.1 → NP_001262229.1  uncharacterized protein Dmel_CG12768, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262229.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRX5, Q9VNP4
      Conserved Domains (1) summary
      smart00595
      Location:12 → 100
      MADF; subfamily of SANT domain

    4. NM_001275301.1 → NP_001262230.1  uncharacterized protein Dmel_CG12768, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262230.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MRX5, Q9VNP4
      Conserved Domains (1) summary
      smart00595
      Location:12 → 100
      MADF; subfamily of SANT domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MRX5 Q8MRX5
    Q9VNP4 Q9VNP4

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