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    SmydA-7 SET and MYND domain containing, arthropod-specific, member 7 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36916, updated on 9-Dec-2024

    Summary

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    Official Symbol
    SmydA-7provided by FlyBase
    Official Full Name
    SET and MYND domain containing, arthropod-specific, member 7provided by FlyBase
    Primary source
    FLYBASE:FBgn0034182
    Locus tag
    Dmel_CG9640
    See related
    AllianceGenome:FB:FBgn0034182
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG9640; Dmel\CG9640
    Summary
    Is expressed in adult head. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See SmydA-7 in Genome Data Viewer
    Location:
    53F1-53F1; 2-81 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17044743..17046768)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12932248..12934273)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 2 Neighboring gene antisense RNA:CR45144 Neighboring gene antisense RNA:CR45145 Neighboring gene SET and MYND domain containing, arthropod-specific, member 6 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary History of the Smyd Gene Family in Metazoans: A Framework to Identify the Orthologs of Human Smyd Genes in Drosophila and Other Animal Species. Calpena E, et al. PLoS One, 2015. PMID 26230726, Free PMC Article
    2. Comparative genomic analysis of SET domain family reveals the origin, expansion, and putative function of the arthropod-specific SmydA genes as histone modifiers in insects. Jiang F, et al. Gigascience, 2017 Jun 1. PMID 28444351, Free PMC Article
    3. Genome features of "Dark-fly", a Drosophila line reared long-term in a dark environment. Izutsu M, et al. PLoS One, 2012. PMID 22432011, Free PMC Article
    4. Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila. Meltzer H, et al. Nat Commun, 2019 May 8. PMID 31068592, Free PMC Article
    5. A genome-wide resource for the analysis of protein localisation in Drosophila. Sarov M, et al. Elife, 2016 Feb 20. PMID 26896675, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables protein-lysine N-methyltransferase activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    SET and MYND domain containing, arthropod-specific, member 7
    Names
    CG9640-PA
    CG9640-PB
    SmydA-7-PA
    SmydA-7-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      17044743..17046768
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274110.1 → NP_001261039.1  SET and MYND domain containing, arthropod-specific, member 7, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261039.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5U179, Q8MSC1

    2. NM_137337.2 → NP_611181.1  SET and MYND domain containing, arthropod-specific, member 7, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611181.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5U179, Q8MSC1
      Related
      FBpp0086126
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5U179 Q5U179
    Q8MSC1 Q8MSC1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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