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    lncRNA:alphagamma-element:CR32865 alphagamma-element:CR32865 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3772597, updated on 11-Sep-2024

    Summary

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    Official Symbol
    lncRNA:alphagamma-element:CR32865provided by FlyBase
    Official Full Name
    alphagamma-element:CR32865provided by FlyBase
    Primary source
    FLYBASE:FBgn0052865
    Locus tag
    Dmel_CR32865
    See related
    AllianceGenome:FB:FBgn0052865
    Gene type
    ncRNA
    RNA name
    lncRNA
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CR32865; Dmel\CR32865; lncRNA:CR32865
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    Genomic context

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    See lncRNA:alphagamma-element:CR32865 in Genome Data Viewer
    Location:
    87B13-87B13; 3-52 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (12475336..12478267, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (8301058..8303989, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Heat shock protein 70 Ba Neighboring gene Heat shock protein 70 Bbb Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of target genes regulated by the Drosophila histone methyltransferase Eggless reveals a role of Decapentaplegic in apoptotic signaling. Kang I, et al. Sci Rep, 2018 May 8. PMID 29740006, Free PMC Article
    2. Microgravity simulation by diamagnetic levitation: effects of a strong gradient magnetic field on the transcriptional profile of Drosophila melanogaster. Herranz R, et al. BMC Genomics, 2012 Feb 1. PMID 22296880, Free PMC Article
    3. Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome. Lipatov M, et al. BMC Biol, 2005 Nov 12. PMID 16283942, Free PMC Article
    4. First transcriptome profiling of D. melanogaster after development in a deep underground low radiation background laboratory. Zarubin M, et al. PLoS One, 2021. PMID 34351964, Free PMC Article
    5. Development of fly tolerance to consuming a high-protein diet requires physiological, metabolic and transcriptional changes. Yurkevych IS, et al. Biogerontology, 2020 Oct. PMID 32468146

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    mobile_element

    • Loc: c12475803-12475405 mobile_element_type = transposon:invader1{}1657
    • Loc: c12477385-12476998 mobile_element_type = transposon:invader1{}1658
    • Loc: c12477425-12476814 mobile_element_type = transposon:Dm88{}lncRNA:alphagamma-element:CR32865[1311]

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      12475336..12478267 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. NR_002020.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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