U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG2444 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32121, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG2444provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030326
    Locus tag
    Dmel_CG2444
    See related
    AllianceGenome:FB:FBgn0030326
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LP01642; DIGF-6; Dmel\CG2444
    Summary
    Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG2444 in Genome Data Viewer
    Location:
    10D5-10D5; 1-35 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (11704310..11705300, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (11598343..11599333, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Valette Neighboring gene bifocal Neighboring gene Phosphorylase kinase gamma Neighboring gene alpha1,6-fucosyltransferase Neighboring gene mir-9370 stem loop Neighboring gene amun

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Contact-based sequence alignment. Kleinjung J, et al. Nucleic Acids Res, 2004. PMID 15121903, Free PMC Article
    2. A novel family of single VWC-domain proteins in invertebrates. Sheldon TJ, et al. FEBS Lett, 2007 Nov 13. PMID 18028914
    3. Microgravity simulation by diamagnetic levitation: effects of a strong gradient magnetic field on the transcriptional profile of Drosophila melanogaster. Herranz R, et al. BMC Genomics, 2012 Feb 1. PMID 22296880, Free PMC Article
    4. The genomic response to 20-hydroxyecdysone at the onset of Drosophila metamorphosis. Beckstead RB, et al. Genome Biol, 2005. PMID 16356271, Free PMC Article
    5. Single-cell RNA sequencing identifies novel cell types in Drosophila blood. Fu Y, et al. J Genet Genomics, 2020 Apr 20. PMID 32487456, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in extracellular space ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG2444-PA
    CG2444-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      11704310..11705300 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298206.1 → NP_001285135.1  uncharacterized protein Dmel_CG2444, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285135.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VYV6
      Conserved Domains (1) summary
      pfam15430
      Location:42 → 110
      SVWC; Single domain von Willebrand factor type C

    2. NM_132511.3 → NP_572739.1  uncharacterized protein Dmel_CG2444, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572739.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VYV6
      Related
      FBpp0073376
      Conserved Domains (1) summary
      pfam15430
      Location:42 → 110
      SVWC; Single domain von Willebrand factor type C
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VYV6 Q9VYV6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools