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    CG31998 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43774, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG31998provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051998
    Locus tag
    Dmel_CG31998
    See related
    AllianceGenome:FB:FBgn0051998
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11572; CG11578; Dmel\CG31998
    Summary
    Is expressed in adult head and organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31998 in Genome Data Viewer
    Location:
    102A7-102A7; 4-0 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 4 NC_004353.4 (196675..205945, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 4 NC_004353.3 (217301..226571, complement)

    Chromosome 4 - NC_004353.4Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily D member 1 Neighboring gene long non-coding RNA:CR44441 Neighboring gene Crk oncogene Neighboring gene uncharacterized protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators. Li J, et al. Cell, 2020 Jan 23. PMID 31955847, Free PMC Article
    2. Painting of fourth and chromosome-wide regulation of the 4th chromosome in Drosophila melanogaster. Johansson AM, et al. EMBO J, 2007 May 2. PMID 17318176, Free PMC Article
    3. Gene transposition as a cause of hybrid sterility in Drosophila. Masly JP, et al. Science, 2006 Sep 8. PMID 16960009
    4. High-resolution mapping of the Drosophila fourth chromosome using site-directed terminal deficiencies. Sousa-Neves R, et al. Genetics, 2005 May. PMID 15466427, Free PMC Article
    5. Genes expressed in the Drosophila head reveal a role for fat cells in sex-specific physiology. Fujii S, et al. EMBO J, 2002 Oct 15. PMID 12374736, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    mobile_element

    • Loc: c202025-201844 mobile_element_type = transposon:INE-1{}4846
    • Loc: c202879-202037 mobile_element_type = transposon:1360{}5391

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31998-PA
    CG31998-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004353.4 Reference assembly

      Range
      196675..205945 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001258481.2 → NP_001245410.1  uncharacterized protein Dmel_CG31998, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245410.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9XVM5
      Conserved Domains (1) summary
      cl03905
      Location:514 → 628
      EXS; EXS family

    2. NM_166742.3 → NP_726548.1  uncharacterized protein Dmel_CG31998, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726548.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V4B6
      Related
      FBpp0088212
      Conserved Domains (1) summary
      cl03905
      Location:610 → 724
      EXS; EXS family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    H9XVM5 H9XVM5
    Q8MR35 Q8MR35
    Q9V4B6 Q9V4B6

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