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    Or59c Odorant receptor 59c [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37716, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or59cprovided by FlyBase
    Official Full Name
    Odorant receptor 59cprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034866
    Locus tag
    Dmel_CG17226
    See related
    AllianceGenome:FB:FBgn0034866
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    59c; 59E.2; CG17226; Dmel\CG17226; DOR120
    Summary
    Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in dendrite membrane. Predicted to be active in plasma membrane. Is expressed in antennal lobe glomerulus VM7; maxillary palp; maxillary palp basiconic sensillum pb3; and olfactory receptor neurons. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Or59c in Genome Data Viewer
    Location:
    59E1-59E1; 2-103 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (23472300..23473753, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (19359823..19361276, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene SKP1-related F Neighboring gene Odorant receptor 59b Neighboring gene long non-coding RNA:CR43792 Neighboring gene long non-coding RNA:CR43793 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables olfactory receptor activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in sensory perception of smell NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in dendrite membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    odorant receptor 59c
    Names
    CG17226-PA
    Or59c-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      23472300..23473753 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079099.2NP_523823.1  odorant receptor 59c [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523823.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W1P7
      Conserved Domains (1) summary
      pfam02949
      Location:79385
      7tm_6; 7tm Odorant receptor