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    Cyt-c-d Cytochrome c distal [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34995, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cyt-c-dprovided by FlyBase
    Official Full Name
    Cytochrome c distalprovided by FlyBase
    Primary source
    FLYBASE:FBgn0086907
    Locus tag
    Dmel_CG13263
    See related
    AllianceGenome:FB:FBgn0086907
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    bln; bs30f07.y1; CG13263; CYC; cyt c; Cyt c; Cyt C; cyt c-d; cyt-c-d; Cyt-c1; cyt.c; cyt.c-d; Cytc; CytC; CYTC; CytC-1; cytc-d; Cytc-d; CytC1; cytochrome c; dc3; DC3; Dmel\CG13263; ms(2)04445; pDMc02
    Summary
    Enables cysteine-type endopeptidase activator activity involved in apoptotic process and electron transfer activity. Involved in regulation of compound eye retinal cell programmed cell death and sperm individualization. Located in cytosol and mitochondrion. Is expressed in several structures, including anterior-posterior subdivision of organism; larval brain; and spermatozoon. Human ortholog(s) of this gene implicated in cholangiocarcinoma; lung non-small cell carcinoma; pancreatic cancer; and thrombocytopenia. Orthologous to human CYCS (cytochrome c, somatic). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Cyt-c-d in Genome Data Viewer
    Location:
    36A11-36A11; 2-52 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (16715891..16719635)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (16715891..16719635)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene grapes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene Cytochrome c proximal Neighboring gene Vacuolar H[+]-ATPase SFD subunit Neighboring gene mir-1006 stem loop

    Genomic regions, transcripts, and products

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase activator activity involved in apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables electron transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables electron transfer activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, cytochrome c to oxygen IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial electron transport, ubiquinol to cytochrome c IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in oxidative phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in regulation of compound eye retinal cell programmed cell death IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in sperm individualization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in mitochondrial intermembrane space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrial intermembrane space ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    cytochrome c distal
    Names
    CG13263-PA
    CG13263-PB
    Cyt-c-d-PA
    Cyt-c-d-PB
    blanks
    cytochrome c
    cytochrome c-d
    cytochrome-c-d

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      16715891..16719635
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_057816.5NP_477164.1  cytochrome c distal, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_477164.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P04657, Q9VJJ4
      UniProtKB/TrEMBL
      M9PD22
      Related
      FBpp0080445
      Conserved Domains (1) summary
      COG3474
      Location:4103
      Cyc7; Cytochrome c2 [Energy production and conversion]
    2. NM_001273580.1NP_001260509.1  cytochrome c distal, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260509.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P04657, Q9VJJ4
      UniProtKB/TrEMBL
      M9PD22
      Conserved Domains (1) summary
      COG3474
      Location:4103
      Cyc7; Cytochrome c2 [Energy production and conversion]