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    Membrin membrin [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38614, updated on 9-Dec-2024

    Summary

    Official Symbol
    Membrinprovided by FlyBase
    Official Full Name
    membrinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0260856
    Locus tag
    Dmel_CG4780
    See related
    AllianceGenome:FB:FBgn0260856
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:SD22572; CG4780; Dmel\CG4780; Memb; membrin; SNARE/membrin
    Summary
    Predicted to enable SNAP receptor activity and SNARE binding activity. Involved in lumen formation, open tracheal system. Predicted to be part of SNARE complex. Predicted to be active in Golgi apparatus; cytoplasmic vesicle membrane; and endoplasmic reticulum membrane. Is expressed in adult head. Used to study progressive myoclonus epilepsy. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 6. Orthologous to human GOSR2 (golgi SNAP receptor complex member 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Membrin in Genome Data Viewer
    Location:
    64C13-64C14; 3-13 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (5366455..5367381)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (5359555..5360481)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Cytochrome c1 Neighboring gene Ubiquitin-conjugating enzyme variant 1A Neighboring gene Prefoldin 4 Neighboring gene long non-coding RNA:CR44515 Neighboring gene long non-coding RNA:CR44516

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables SNAP receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables SNAP receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables SNARE binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in lumen formation, open tracheal system HMP PubMed 
    involved_in vesicle fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vesicle fusion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in ER to Golgi transport vesicle membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of SNARE complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of SNARE complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in late endosome membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    membrin
    Names
    CG4780-PA
    Membrin-PA
    fmembrin
    moon cheese

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      5366455..5367381
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139703.4NP_647960.1  membrin [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647960.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B5RJH1, Q8MRU9, Q9VRL2
      Related
      FBpp0076849
      Conserved Domains (1) summary
      cd15863
      Location:124188
      SNARE_GS27; SNARE motif of GS27