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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001036684.4 → NP_001031761.1 plasma membrane calcium-transporting ATPase 2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding region, compared to variant 3. These differences result in a shorter protein (isoform 1), compared to isoform 2. Variants 1, 2, 6, and 7 all encode the same isoform (1).
- Source sequence(s)
-
AC117596
- Consensus CDS
-
CCDS20433.1
- UniProtKB/Swiss-Prot
- O88863, Q9R0K7
- UniProtKB/TrEMBL
- D5L240, Q3UHJ3
- Related
- ENSMUSP00000086398.6, ENSMUST00000089003.12
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1042
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1081 → 1127
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
NM_001347365.2 → NP_001334294.1 plasma membrane calcium-transporting ATPase 2 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) encodes isoform 2. Variants 3 and 4 both encode the same isoform (2).
- Source sequence(s)
-
AC117596, AC153590
- Consensus CDS
-
CCDS85130.1
- UniProtKB/TrEMBL
- D5L240, F8WHB1
- Related
- ENSMUSP00000098605.3, ENSMUST00000101044.9
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
NM_001409523.1 → NP_001396452.1 plasma membrane calcium-transporting ATPase 2 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC117596
- UniProtKB/TrEMBL
- D5L240, F8WHB1
-
NM_001409524.1 → NP_001396453.1 plasma membrane calcium-transporting ATPase 2 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC117596, AC153590
- UniProtKB/TrEMBL
-
D5L240
-
NM_001409526.1 → NP_001396455.1 plasma membrane calcium-transporting ATPase 2 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC117596, AC153590
- UniProtKB/Swiss-Prot
- O88863, Q9R0K7
- UniProtKB/TrEMBL
- D5L240, Q3UHJ3
-
NM_001409529.1 → NP_001396458.1 plasma membrane calcium-transporting ATPase 2 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AC117596, AC153590
- UniProtKB/Swiss-Prot
- O88863, Q9R0K7
- UniProtKB/TrEMBL
- D5L240, Q3UHJ3
-
NM_001409533.1 → NP_001396462.1 plasma membrane calcium-transporting ATPase 2 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC117596
- UniProtKB/TrEMBL
- D5L240, Q3UHH0
- Related
- ENSMUSP00000145174.2, ENSMUST00000205052.3
-
NM_001409534.1 → NP_001396463.1 plasma membrane calcium-transporting ATPase 2 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC117596
- UniProtKB/TrEMBL
-
D5L240
-
NM_001409535.1 → NP_001396464.1 plasma membrane calcium-transporting ATPase 2 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC117596
- UniProtKB/TrEMBL
-
D5L240
-
NM_001409536.1 → NP_001396465.1 plasma membrane calcium-transporting ATPase 2 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC117596
- UniProtKB/TrEMBL
- D5L240, S4R1C4
-
NM_001409537.1 → NP_001396466.1 plasma membrane calcium-transporting ATPase 2 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC117596
- UniProtKB/TrEMBL
- D5L240, S4R1C4
-
NM_009723.7 → NP_033853.1 plasma membrane calcium-transporting ATPase 2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) differs in the 5' UTR and coding region, compared to variant 3. These differences result in a shorter protein (isoform 1), compared to isoform 2. Variants 1, 2, 6, and 7 all encode the same isoform (1).
- Source sequence(s)
-
AC117596, AC153590
- Consensus CDS
-
CCDS20433.1
- UniProtKB/Swiss-Prot
- O88863, Q9R0K7
- UniProtKB/TrEMBL
- D5L240, Q3UHJ3
- Related
- ENSMUSP00000098606.4, ENSMUST00000101045.10
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1042
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1081 → 1127
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
RNA
-
NR_176856.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC117596, AC153590
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000072.7 Reference GRCm39 C57BL/6J
- Range
-
113720803..114019574 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011241161.1 → XP_011239463.1 plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/TrEMBL
- D5L240, F8WHB1
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_011241167.3 → XP_011239469.1 plasma membrane calcium-transporting ATPase 2 isoform X4
- UniProtKB/TrEMBL
-
D5L240
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1168
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_011241168.2 → XP_011239470.1 plasma membrane calcium-transporting ATPase 2 isoform X5
- UniProtKB/TrEMBL
-
D5L240
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1168
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_030255122.2 → XP_030110982.1 plasma membrane calcium-transporting ATPase 2 isoform X10
- UniProtKB/TrEMBL
-
D5L240
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1201
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_011241162.4 → XP_011239464.1 plasma membrane calcium-transporting ATPase 2 isoform X1
- UniProtKB/TrEMBL
- D5L240, F8WHB1
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1087
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1126 → 1172
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_011241166.4 → XP_011239468.1 plasma membrane calcium-transporting ATPase 2 isoform X3
- UniProtKB/TrEMBL
-
D5L240
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1056
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1095 → 1141
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_030255120.2 → XP_030110980.1 plasma membrane calcium-transporting ATPase 2 isoform X3
- UniProtKB/TrEMBL
-
D5L240
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1056
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1095 → 1141
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_030255119.2 → XP_030110979.1 plasma membrane calcium-transporting ATPase 2 isoform X2
- UniProtKB/TrEMBL
-
D5L240
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1073
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1112 → 1158
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_036165762.1 → XP_036021655.1 plasma membrane calcium-transporting ATPase 2 isoform X9
- UniProtKB/TrEMBL
- D5L240, S4R1C4
- Related
- ENSMUSP00000138165.2, ENSMUST00000152831.8
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1042
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1081 → 1123
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_011241170.2 → XP_011239472.1 plasma membrane calcium-transporting ATPase 2 isoform X8
- UniProtKB/TrEMBL
-
D5L240
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1042
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1081 → 1123
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
-
XM_011241169.3 → XP_011239471.1 plasma membrane calcium-transporting ATPase 2 isoform X7
- UniProtKB/TrEMBL
-
D5L240
- Conserved Domains (2) summary
-
- TIGR01517
Location:12 → 1056
- ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
- pfam12424
Location:1095 → 1137
- ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
RNA
-
XR_868849.2 RNA Sequence
-
XR_001785094.3 RNA Sequence