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    GRIP/coiled-coil protein, putative (DUF1664) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814802, updated on 18-Sep-2024

    Summary

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    Official Full Name
    GRIP/coiled-coil protein, putative (DUF1664)
    Primary source
    TAIR:AT2G02730
    Locus tag
    AT2G02730
    See related
    Araport:AT2G02730
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20F6.13; T20F6_13
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    14
    Sequence:
    Chromosome: 2; NC_003071.7 (764547..767500, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene PAS/LOV protein B Neighboring gene Pectate lyase family protein Neighboring gene ncRNA Neighboring gene ssDNA-binding transcriptional regulator Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001335133.1
    NM_126328.4
    NM_201673.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GRIP/coiled-coil protein, putative (DUF1664)
    NP_178376.1
    • Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G27000.1); Has 150 Blast hits to 150 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_973402.1
    • Protein of unknown function (DUF1664); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1664 (InterPro:IPR012458); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1664) (TAIR:AT1G27000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      764547..767500 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_201673.1 → NP_973402.1  GRIP/coiled-coil protein, putative (DUF1664) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973402.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXR4, A0A384L2Y3, O64509
      Conserved Domains (1) summary
      pfam07889
      Location:90 → 211
      DUF1664; Protein of unknown function (DUF1664)

    2. NM_126328.4 → NP_178376.1  GRIP/coiled-coil protein, putative (DUF1664) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178376.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXR4, A0A384L2Y3, O64509
      Conserved Domains (1) summary
      pfam07889
      Location:90 → 211
      DUF1664; Protein of unknown function (DUF1664)

    3. NM_001335133.1 → NP_001324283.1  GRIP/coiled-coil protein, putative (DUF1664) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VXR4, A0A384L2Y3, O64509
      Conserved Domains (1) summary
      pfam07889
      Location:90 → 211
      DUF1664; Protein of unknown function (DUF1664)
    Nucleotide Protein
    Heading Accession and Version

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