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    RNA-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816042, updated on 18-Sep-2024

    Summary

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    Official Full Name
    RNA-binding protein
    Primary source
    TAIR:AT2G15500
    Locus tag
    AT2G15500
    See related
    Araport:AT2G15500
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (6763707..6764751)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Pectin lyase-like superfamily protein Neighboring gene UDP-glucosyl transferase 73B5 Neighboring gene UDP-glycosyltransferase 73B4 Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    RNA-binding protein
    NP_179152.1
    • RNA-binding protein; BEST Arabidopsis thaliana protein match is: poly(A) binding protein 2 (TAIR:AT4G34110.1); Has 110 Blast hits to 110 proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 13; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      6763707..6764751
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127110.1 → NP_179152.1  RNA-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179152.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9ZQG2
      Conserved Domains (1) summary
      TIGR01628
      Location:3 → 89
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    Nucleotide Protein
    Heading Accession and Version

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