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    ELF4-L3 ELF4-like 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 815182, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ELF4-L3
    Official Full Name
    ELF4-like 3
    Primary source
    TAIR:AT2G06255
    Locus tag
    AT2G06255
    See related
    Araport:AT2G06255
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ELF4-like 3
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    Genomic context

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    See ELF4-L3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (2457573..2459940)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis ELF4-like proteins EFL1 and EFL3 influence flowering time. Lin K, et al. Gene, 2019 Jun 5. PMID 30917931
    2. Identification of Evening Complex Associated Proteins in Arabidopsis by Affinity Purification and Mass Spectrometry. Huang H, et al. Mol Cell Proteomics, 2016 Jan. PMID 26545401, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_126634.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein homodimerization activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within photoperiodism, flowering IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in positive regulation of circadian rhythm IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    ELF4-like 3
    NP_565334.1
    • ELF4-like 3 (ELF4-L3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1313 (InterPro:IPR009741); BEST Arabidopsis thaliana protein match is: ELF4-like 4 (TAIR:AT1G17455.2); Has 149 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      2457573..2459940
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126634.3 → NP_565334.1  ELF4-like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565334.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8S8F5
      UniProtKB/TrEMBL
      A0A178VTU4, A0A5S9WXS8, A0A654ES86
      Conserved Domains (1) summary
      pfam07011
      Location:15 → 97
      DUF1313; Protein of unknown function (DUF1313)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S8F5.1

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