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    EXT6 Proline-rich extensin-like family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817037, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EXT6
    Official Full Name
    Proline-rich extensin-like family protein
    Primary source
    TAIR:AT2G24980
    Locus tag
    AT2G24980
    See related
    Araport:AT2G24980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    extensin 6; F27C12.10; F27C12_10
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    Genomic context

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    See EXT6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (10622396..10624309)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein, putative (DUF239) Neighboring gene Myb/SANT-like DNA-binding domain protein Neighboring gene spindle/kinetochore-associated protein Neighboring gene Serine/threonine-protein kinase Rio1 Neighboring gene WRKY DNA-binding protein 60

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128056.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of cell wall IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in plant-type cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Proline-rich extensin-like family protein
    NP_180070.1
    • Proline-rich extensin-like family protein; FUNCTIONS IN: structural constituent of cell wall; INVOLVED IN: plant-type cell wall organization; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Extensin-like repeat (InterPro:IPR006706); BEST Arabidopsis thaliana protein match is: proline-rich extensin-like family protein (TAIR:AT5G35190.1); Has 220761 Blast hits to 34768 proteins in 1520 species: Archae - 438; Bacteria - 30458; Metazoa - 82691; Fungi - 36561; Plants - 34369; Viruses - 5711; Other Eukaryotes - 30533 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10622396..10624309
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335966.1 → NP_001323841.1  Proline-rich extensin-like family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AY99

    2. NM_001335967.1 → NP_001323842.1  Proline-rich extensin-like family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AYF2

    3. NM_128056.2 → NP_180070.1  Proline-rich extensin-like family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180070.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9SK35
    Nucleotide Protein
    Heading Accession and Version

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