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    ARI10 RING/U-box superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817733, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARI10
    Official Full Name
    RING/U-box superfamily protein
    Primary source
    TAIR:AT2G31760
    Locus tag
    AT2G31760
    See related
    Araport:AT2G31760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS ARIADNE 10; ARIADNE 10; ATARI10; F20M17.20; F20M17_20
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    Genomic context

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    See ARI10 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (13508493..13510390)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    RING/U-box superfamily protein
    NP_180735.1
    • ARIADNE 10 (ARI10); FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G31770.1); Has 3151 Blast hits to 3123 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 1297; Fungi - 638; Plants - 670; Viruses - 10; Other Eukaryotes - 536 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13508493..13510390
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128734.1 → NP_180735.1  RING/U-box superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180735.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SKC4
      UniProtKB/TrEMBL
      A0A178VNM4, A0A5S9X390, A0A654EXX7
      Conserved Domains (3) summary
      smart00647
      Location:190 → 251
      IBR; In Between Ring fingers
      cd16623
      Location:121 → 171
      RING-HC_RBR_TRIAD1_like; RING finger, HC subclass, found in two RING fingers and DRIL [double RING finger linked] 1 (TRIAD1), ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
      pfam01485
      Location:273 → 312
      IBR; IBR domain, a half RING-finger domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SKC4.1

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