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    TPRXL [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837204, updated on 18-Sep-2024

    Summary

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    Official Full Name
    TPRXL
    Primary source
    TAIR:AT1G06930
    Locus tag
    AT1G06930
    See related
    Araport:AT1G06930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4H5.24; F4H5_24
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (2128843..2129883)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transcription repressor OFP17-like protein Neighboring gene ncRNA Neighboring gene endonuclease/glycosyl hydrolase Neighboring gene translocon at the inner envelope membrane of chloroplasts 110 Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_100567.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    TPRXL
    NP_172175.1
    • unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      2128843..2129883
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100567.2 → NP_172175.1  TPRXL [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172175.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W348, Q5BQ22
    Nucleotide Protein
    Heading Accession and Version

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