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    transferring glycosyl group transferase (DUF604) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837183, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transferring glycosyl group transferase (DUF604)
    Primary source
    TAIR:AT1G01570
    Locus tag
    AT1G01570
    See related
    Araport:AT1G01570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22L4.11; F22L4_11
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (204935..207642)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene BPS1-like protein (DUF793) Neighboring gene MAP kinase 11 Neighboring gene ferric reduction oxidase 2 Neighboring gene ferric reduction oxidase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The plant glycosyltransferase clone collection for functional genomics. Lao J, et al. Plant J, 2014 Aug. PMID 24905498
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_100039.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transferring glycosyl group transferase (DUF604)
    NP_171663.1
    • FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF604 (InterPro:IPR006740); BEST Arabidopsis thaliana protein match is: fringe-related protein (TAIR:AT4G00300.1); Has 558 Blast hits to 547 proteins in 95 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 169; Plants - 281; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      204935..207642
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001331283.1 → NP_001322080.1  transferring glycosyl group transferase (DUF604) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WJ90, A0A384KHB2, A0A5S9S2B2, A0A654E810, Q9LMM4
      Conserved Domains (1) summary
      pfam04646
      Location:224 → 480
      DUF604; Protein of unknown function, DUF604

    2. NM_100039.1 → NP_171663.1  transferring glycosyl group transferase (DUF604) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171663.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9S2B2, A0A654E810, F4HU33
      Conserved Domains (1) summary
      pfam04646
      Location:193 → 449
      DUF604; Protein of unknown function, DUF604
    Nucleotide Protein
    Heading Accession and Version

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