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    IDL1 inflorescence deficient in abscission (IDA)-like 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822153, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IDL1
    Official Full Name
    inflorescence deficient in abscission (IDA)-like 1
    Primary source
    TAIR:AT3G25655
    Locus tag
    AT3G25655
    See related
    Araport:AT3G25655
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    inflorescence deficient in abscission (IDA)-like 1
    Summary
    Similar to Inflorescence Deficient in Abscission (IDA). Involved in floral organ abscission.
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    Genomic context

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    See IDL1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (9337431..9338075, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SKP1-like 15 Neighboring gene ncRNA Neighboring gene Amidase family protein Neighboring gene Leucine-rich repeat (LRR) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The IDA/IDA-LIKE and PIP/PIP-LIKE gene families in Arabidopsis: phylogenetic relationship, expression patterns, and transcriptional effect of the PIPL3 peptide. Vie AK, et al. J Exp Bot, 2015 Aug. PMID 26062745, Free PMC Article
    2. The EPIP peptide of INFLORESCENCE DEFICIENT IN ABSCISSION is sufficient to induce abscission in arabidopsis through the receptor-like kinases HAESA and HAESA-LIKE2. Stenvik GE, et al. Plant Cell, 2008 Jul. PMID 18660431, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Members of the IDA/IDL and PIP/PIPL gene families are expressed during development or induced by stress.
      Title: The IDA/IDA-LIKE and PIP/PIP-LIKE gene families in Arabidopsis: phylogenetic relationship, expression patterns, and transcriptional effect of the PIPL3 peptide.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_113464.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within floral organ abscission IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    inflorescence deficient in abscission (IDA)-like 1
    NP_566774.1
    • inflorescence deficient in abscission (IDA)-like 1 (IDL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: floral organ abscission; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9337431..9338075 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113464.3 → NP_566774.1  inflorescence deficient in abscission (IDA)-like 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566774.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q29PV4, Q8LDA6
      UniProtKB/TrEMBL
      A0A178VF63, A0A5S9XFK5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q29PV4.1

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