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    DER2.1 DERLIN-2.1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828269, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DER2.1
    Official Full Name
    DERLIN-2.1
    Primary source
    TAIR:AT4G21810
    Locus tag
    AT4G21810
    See related
    Araport:AT4G21810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DERLIN-2.1; T8O5.20; T8O5_20
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    Genomic context

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    See DER2.1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (11575096..11577254, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene tobamovirus multiplication 1 Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene binding / calmodulin binding protein Neighboring gene methionine sulfoxide reductase B7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118301.7

    General protein information

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    Preferred Names
    DERLIN-2.1
    NP_193912.3
    • DERLIN-2.1 (DER2.1); CONTAINS InterPro DOMAIN/s: Der1-like (InterPro:IPR007599); BEST Arabidopsis thaliana protein match is: DERLIN-2.2 (TAIR:AT4G04860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11575096..11577254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118301.7 → NP_193912.3  DERLIN-2.1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193912.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49704, Q8VZ96, Q9M0L7, Q9SVR6
      UniProtKB/TrEMBL
      A0A5S9XUJ6, A0A654FRQ5, A0A7G2EXF1
      Conserved Domains (1) summary
      cl21536
      Location:12 → 212
      Rhomboid; Rhomboid family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VZ96.3

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