WRKY7 WRKY DNA-binding protein 7 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: WRKY7
Official Full Name: WRKY DNA-binding protein 7
Primary source: TAIR:AT4G24240
Locus tag: AT4G24240
See related: Araport:AT4G24240
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATWRKY7; T22A6.70; T22A6_70; WRKY DNA-binding protein 7
Summary: Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.
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Genomic context

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See WRKY7 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 2

Sequence:: Chromosome: 4; NC_003075.7 (12571538..12573783)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathogen-induced WRKY7 transcription factor plays a negative role in defense responses to P. syringae.
Title: Pathogen-induced Arabidopsis WRKY7 is a transcriptional repressor and enhances plant susceptibility to Pseudomonas syringae.
Ca(2+)-dependent Calmodulin-binding domain of AtWRKY7 is a conserved structural motif (C-motif) found in group IId of the WRKY protein family[WRKY7]
Title: WRKY group IId transcription factors interact with calmodulin.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001341654.1

Supported by ESTs:

NM_118557.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	IEA Inferred from Electronic Annotation more info
enables DNA-binding transcription factor activity	ISS Inferred from Sequence or Structural Similarity more info	PubMed
enables calmodulin binding	IDA Inferred from Direct Assay more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info
enables transcription cis-regulatory region binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IC Inferred by Curator more info	PubMed
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: WRKY DNA-binding protein 7

NP_194155.1

WRKY DNA-binding protein 7 (WRKY7); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 11 (TAIR:AT4G31550.1); Has 3521 Blast hits to 3002 proteins in 204 species: Archae - 0; Bacteria - 2; Metazoa - 39; Fungi - 4; Plants - 3353; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

12571538..12573783

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_118557.4 → NP_194155.1 WRKY DNA-binding protein 7 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_194155.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9STX0

UniProtKB/TrEMBL

A0A178UYG7, A0A5S9XVC9, A0A654FSB7

Conserved Domains (2) summary

smart00774
Location:280 → 338

WRKY; DNA binding domain

pfam10533
Location:237 → 278

Plant_zn_clust; Plant zinc cluster domain
NM_001341654.1 → NP_001329713.1 WRKY DNA-binding protein 7 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B8K6, A0A654FSB7

Conserved Domains (2) summary

pfam10533
Location:237 → 278

Plant_zn_clust; Plant zinc cluster domain

cl03892
Location:280 → 301

WRKY; WRKY DNA -binding domain