Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Full Name: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Primary source: TAIR:AT4G24970
Locus tag: AT4G24970
See related: Araport:AT4G24970
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F13M23.110; F13M23_110
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Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

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NM_118629.3

Function	Evidence Code	Pubs
enables ATP hydrolysis activity	ISS Inferred from Sequence or Structural Similarity more info
enables DNA binding	ISS Inferred from Sequence or Structural Similarity more info
enables RNA binding	ISS Inferred from Sequence or Structural Similarity more info
enables endonuclease activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in gene silencing by siRNA-directed DNA methylation	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in positive regulation of defense response to oomycetes	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in regulation of DNA repair	ISS Inferred from Sequence or Structural Similarity more info
involved_in regulation of gene silencing by regulatory ncRNA	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
colocalizes_with chromocenter	IDA Inferred from Direct Assay more info	PubMed
located_in nuclear body	IDA Inferred from Direct Assay more info	PubMed
located_in nucleoplasm	IDA Inferred from Direct Assay more info	PubMed
located_in nucleus	ISM Inferred from Sequence Model more info
located_in nucleus	ISS Inferred from Sequence or Structural Similarity more info

Preferred Names: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein

NP_194227.2

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; FUNCTIONS IN: ATP binding; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT5G50780.1); Has 769 Blast hits to 718 proteins in 131 species: Archae - 4; Bacteria - 82; Metazoa - 313; Fungi - 18; Plants - 223; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).

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The following sections contain reference sequences that belong to a specific genome build. Explain