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    cotton fiber protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828719, updated on 18-Sep-2024

    Summary

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    Official Full Name
    cotton fiber protein
    Primary source
    TAIR:AT4G26130
    Locus tag
    AT4G26130
    See related
    Araport:AT4G26130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20B18.240; F20B18_240
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (13239979..13241537, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene nucleosome assembly protein1;1 Neighboring gene Ankyrin repeat family protein / BTB/POZ domain-containing protein Neighboring gene beta-galactosidase 12 Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118746.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    cotton fiber protein
    NP_194343.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13239979..13241537 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118746.4 → NP_194343.1  cotton fiber protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194343.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FSV0, A0A7G2F7G9, Q9SZI4
      Conserved Domains (1) summary
      pfam05553
      Location:250 → 284
      DUF761; Cotton fibre expressed protein
    Nucleotide Protein
    Heading Accession and Version

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