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    CCT motif family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828903, updated on 18-Sep-2024

    Summary

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    Official Full Name
    CCT motif family protein
    Primary source
    TAIR:AT4G27900
    Locus tag
    AT4G27900
    See related
    Araport:AT4G27900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T13J8.10; T13J8_10
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (13890472..13893073)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Ala Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene SET domain protein 16 Neighboring gene PYR1-like 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_118928.4
    NM_179130.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of flower development IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CCT motif family protein
    NP_194519.1
    • CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G53420.1); Has 1589 Blast hits to 1589 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1545; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
    NP_849461.1
    • CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G53420.1); Has 1589 Blast hits to 1589 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1545; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13890472..13893073
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179130.3 → NP_849461.1  CCT motif family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849461.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZH8, Q8L9Z3, Q9SUE8
      Conserved Domains (1) summary
      pfam06203
      Location:214 → 257
      CCT; CCT motif

    2. NM_118928.4 → NP_194519.1  CCT motif family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194519.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UZH8, Q8L9Z3, Q9SUE8
      Conserved Domains (1) summary
      pfam06203
      Location:214 → 257
      CCT; CCT motif
    Nucleotide Protein
    Heading Accession and Version

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