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    DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829677, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632)
    Primary source
    TAIR:AT4G35240
    Locus tag
    AT4G35240
    See related
    Araport:AT4G35240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23E12.200; F23E12_200
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (16760937..16767087, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene BR-signaling kinase 1 Neighboring gene miscRNA Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene isocitrate dehydrogenase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203992.1
    NM_001342331.1
    NM_119690.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632)
    NP_001190921.1
    • Protein of unknown function (DUF630 and DUF632); EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1).
    NP_195250.2
    • Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT2G17110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16760937..16767087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342330.1 → NP_001328300.1  DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B479, A0A5S9XZN5, A0A654FVN9
      Conserved Domains (2) summary
      pfam04782
      Location:423 → 729
      DUF632; Protein of unknown function (DUF632)
      pfam04783
      Location:1 → 59
      DUF630; Protein of unknown function (DUF630)

    2. NM_119690.2 → NP_195250.2  DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195250.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZN5, F4JMA6
      Conserved Domains (2) summary
      pfam04782
      Location:423 → 730
      DUF632; Protein of unknown function (DUF632)
      pfam04783
      Location:1 → 59
      DUF630; Protein of unknown function (DUF630)

    3. NM_001342331.1 → NP_001328299.1  DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B479, A0A5S9XZN5, A0A654FVN9
      Conserved Domains (2) summary
      pfam04782
      Location:423 → 729
      DUF632; Protein of unknown function (DUF632)
      pfam04783
      Location:1 → 59
      DUF630; Protein of unknown function (DUF630)

    4. NM_001203992.1 → NP_001190921.1  DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190921.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XZN5, F4JMA6
      Conserved Domains (2) summary
      pfam04782
      Location:423 → 730
      DUF632; Protein of unknown function (DUF632)
      pfam04783
      Location:1 → 59
      DUF630; Protein of unknown function (DUF630)
    Nucleotide Protein
    Heading Accession and Version

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