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    Mad3/BUB1 homology region 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830434, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Mad3/BUB1 homology region 1
    Primary source
    TAIR:AT5G05510
    Locus tag
    AT5G05510
    See related
    Araport:AT5G05510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MOP10.5; MOP10_5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (1630559..1632739, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein Neighboring gene Rad21/Rec8-like family protein Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene Outer membrane OMP85 family protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conserved CDC20 cell cycle functions are carried out by two of the five isoforms in Arabidopsis thaliana. Kevei Z, et al. PLoS One, 2011. PMID 21687678, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_120633.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic spindle assembly checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Mad3/BUB1 homology region 1
    NP_196170.1
    • Mad3/BUB1 homology region 1; CONTAINS InterPro DOMAIN/s: Mitotic checkpoint serine/threonine protein kinase, Bub1 (InterPro:IPR015661), Mad3/BUB1 homology region 1 (InterPro:IPR013212); BEST Arabidopsis thaliana protein match is: BUB1-related (BUB1: budding uninhibited by benzymidazol 1) (TAIR:AT2G33560.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      1630559..1632739 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120633.3 → NP_196170.1  Mad3/BUB1 homology region 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196170.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UDA3, A0A654FYN4, Q9FFG4
      Conserved Domains (1) summary
      smart00777
      Location:9 → 131
      Mad3_BUB1_I; Mad3/BUB1 hoMad3/BUB1 homology region 1
    Nucleotide Protein
    Heading Accession and Version

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