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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830629, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT5G07380
    Locus tag
    AT5G07380
    See related
    Araport:AT5G07380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T2I1.90; T2I1_90
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    13
    Sequence:
    Chromosome: 5; NC_003076.8 (2332436..2336063)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene TUDOR-SN protein 1 Neighboring gene Amidase family protein Neighboring gene inositol polyphosphate kinase 2 alpha Neighboring gene respiratory burst oxidase homolog A Neighboring gene forkhead-associated domain-containing protein / FHA domain-containing protein Neighboring gene Pectin lyase-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036771.2
    NM_001085072.2
    NM_001342934.1
    NM_001342935.1
    NM_001342936.1
    NM_120820.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001031848.1
    • unknown protein; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_001078541.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    NP_196355.2
    • unknown protein; Has 84 Blast hits to 81 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2332436..2336063
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120820.4 → NP_196355.2  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196355.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U929, A0A654FZ61, Q5Q0B0

    2. NM_001342934.1 → NP_001332075.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U929, A0A654FZ61, Q5Q0B0

    3. NM_001036771.2 → NP_001031848.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031848.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U929, A0A654FZ61, Q5Q0B0

    4. NM_001342935.1 → NP_001332076.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U929, Q1PDZ3

    5. NM_001085072.2 → NP_001078541.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078541.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U929, Q1PDZ3

    6. NM_001342936.1 → NP_001332074.1  uncharacterized protein AT5G07380 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U929, A0A1P8BFY2
    Nucleotide Protein
    Heading Accession and Version

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