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    FZR3 FIZZY-related 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831230, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FZR3
    Official Full Name
    FIZZY-related 3
    Primary source
    TAIR:AT5G13840
    Locus tag
    AT5G13840
    See related
    Araport:AT5G13840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CCS52B; cell cycle switch protein 52 B; FIZZY-related 3; MAC12.21; MAC12_21
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    Genomic context

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    See FZR3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (4468508..4471466, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene FtsJ-like methyltransferase family protein Neighboring gene ncRNA Neighboring gene tRNA-Lys Neighboring gene ncRNA Neighboring gene nascent polypeptide-associated complex subunit alpha-like protein 3 Neighboring gene ELCH-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An insight into critical endocycle genes for plant-parasitic nematode feeding sites establishment. Vieira P, et al. Plant Signal Behav, 2013 Jun. PMID 23518580, Free PMC Article
    2. CCS52 and DEL1 genes are key components of the endocycle in nematode-induced feeding sites. de Almeida Engler J, et al. Plant J, 2012 Oct. PMID 22640471
    3. OSD1 promotes meiotic progression via APC/C inhibition and forms a regulatory network with TDM and CYCA1;2/TAM. Cromer L, et al. PLoS Genet, 2012. PMID 22844260, Free PMC Article
    4. GIGAS CELL1, a novel negative regulator of the anaphase-promoting complex/cyclosome, is required for proper mitotic progression and cell fate determination in Arabidopsis. Iwata E, et al. Plant Cell, 2011 Dec. PMID 22167058, Free PMC Article
    5. Specialization of CDC27 function in the Arabidopsis thaliana anaphase-promoting complex (APC/C). Pérez-Pérez JM, et al. Plant J, 2008 Jan. PMID 17944809

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001203376.1
    NM_121387.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables anaphase-promoting complex binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    FIZZY-related 3
    NP_001190305.1
    • FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1).
    NP_196888.2
    • FIZZY-related 3 (FZR3); FUNCTIONS IN: signal transducer activity; INVOLVED IN: signal transduction; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: FIZZY-related 2 (TAIR:AT4G22910.1); Has 48305 Blast hits to 24690 proteins in 714 species: Archae - 60; Bacteria - 7363; Metazoa - 18902; Fungi - 10741; Plants - 5341; Viruses - 0; Other Eukaryotes - 5898 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4468508..4471466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203376.1 → NP_001190305.1  FIZZY-related 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190305.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LPL5, Q9FFY8
      UniProtKB/TrEMBL
      A0A178UQT9, A0A5S9Y476
      Conserved Domains (3) summary
      COG2319
      Location:176 → 462
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:197 → 456
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:218 → 253
      7WD40; WD40 repeat [structural motif]

    2. NM_121387.4 → NP_196888.2  FIZZY-related 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196888.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LPL5, Q9FFY8
      UniProtKB/TrEMBL
      A0A178UQT9, A0A5S9Y476
      Conserved Domains (3) summary
      COG2319
      Location:176 → 462
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:197 → 456
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:218 → 253
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LPL5.1

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