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    GFA2 gametophytic factor 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834854, updated on 18-Sep-2024

    Summary

    Official Symbol
    GFA2
    Official Full Name
    gametophytic factor 2
    Primary source
    TAIR:AT5G48030
    Locus tag
    AT5G48030
    See related
    Araport:AT5G48030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    gametophytic factor 2; MDN11.11; MDN11_11
    Summary
    encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.
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    Genomic context

    See GFA2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    18
    Sequence:
    Chromosome: 5; NC_003076.8 (19465788..19469939, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene thalianol synthase 1 Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene Ubiquitin carboxyl-terminal hydrolase family protein Neighboring gene Copia-like polyprotein/retrotransposon

    Interactions

    General gene information

    NM_124177.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding  
    enables heat shock protein binding  
    enables unfolded protein binding  
    Component Evidence Code Pubs
    located_in chloroplast  
    located_in mitochondrion PubMed 

    General protein information

    Preferred Names
    gametophytic factor 2
    NP_568690.1
    • gametophytic factor 2 (GFA2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253), Heat shock protein DnaJ, cysteine-rich domain (InterPro:IPR001305), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G28210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19465788..19469939 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124177.4 → NP_568690.1  gametophytic factor 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568690.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWW8, Q8L8A1, Q8LEU4, Q9FI35
      UniProtKB/TrEMBL
      A0A178UJR3, A0A5S9YC12, A0A654GA03
      Conserved Domains (1) summary
      COG0484
      Location:90 → 450
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
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