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    Galactose mutarotase-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836785, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Galactose mutarotase-like superfamily protein
    Primary source
    TAIR:AT5G66530
    Locus tag
    AT5G66530
    See related
    Araport:AT5G66530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K1F13.19; K1F13_19
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    13
    Sequence:
    Chromosome: 5; NC_003076.8 (26551755..26555886, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene gamma carbonic anhydrase 3 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene tRNA-Asn Neighboring gene U3 small nucleolar ribonucleoprotein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. Bindschedler LV, et al. Phytochemistry, 2008 Jul. PMID 18538804
    2. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701
    3. Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. Rutschow H, et al. Plant Physiol, 2008 Sep. PMID 18633119, Free PMC Article
    4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    5. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001203706.2
    NM_001345766.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glucose-6-phosphate 1-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in apoplast HDA PubMed 
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Galactose mutarotase-like superfamily protein
    NP_001190635.1
    • Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1).
    NP_001318889.1
    • Galactose mutarotase-like superfamily protein; FUNCTIONS IN: carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: apoplast, chloroplast, chloroplast stroma; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT5G57330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26551755..26555886 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345765.1 → NP_001318889.1  Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFI0, A0A654GEN4, Q9FJY6
      Conserved Domains (1) summary
      cd09020
      Location:47 → 305
      D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

    2. NM_126051.5 → NP_201454.1  Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201454.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFI0, A0A654GEN4, Q9FJY6
      Conserved Domains (1) summary
      cd09020
      Location:47 → 305
      D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

    3. NM_001203706.2 → NP_001190635.1  Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190635.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFI0, A0A654GEN4, Q9FJY6
      Conserved Domains (1) summary
      cd09020
      Location:47 → 305
      D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

    4. NM_001345766.1 → NP_001331258.1  Galactose mutarotase-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BDF7, A0A7G2FJD3
    Nucleotide Protein
    Heading Accession and Version

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