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    ATP binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842141, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATP binding protein
    Primary source
    TAIR:AT1G57650
    Locus tag
    AT1G57650
    See related
    Araport:AT1G57650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8L23.12; T8L23_12
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (21351166..21354311)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein Neighboring gene pseudo Neighboring gene Translation protein SH3-like family protein Neighboring gene Toll-Interleukin-Resistance (TIR) domain family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in defense response IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ATP binding protein
    NP_001185254.1
    • ATP binding; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G14080.1).
    NP_176078.4
    • ATP binding; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G14080.1); Has 13458 Blast hits to 7685 proteins in 338 species: Archae - 14; Bacteria - 666; Metazoa - 852; Fungi - 31; Plants - 11387; Viruses - 8; Other Eukaryotes - 500 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21351166..21354311
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333802.1 → NP_001321773.1  ATP binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ARZ1, Q9FVT7

    2. NM_104562.4 → NP_176078.4  ATP binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176078.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I847, Q9FVT7
      Conserved Domains (2) summary
      sd00033
      Location:289 → 316
      LRR_RI; leucine-rich repeat [structural motif]
      pfam07725
      Location:338 → 357
      LRR_3; Leucine Rich Repeat

    3. NM_001198325.1 → NP_001185254.1  ATP binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185254.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I848, Q9FVT7
      Conserved Domains (2) summary
      sd00033
      Location:289 → 316
      LRR_RI; leucine-rich repeat [structural motif]
      pfam07725
      Location:338 → 357
      LRR_3; Leucine Rich Repeat

    4. NM_001333803.1 → NP_001321774.1  ATP binding protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AS20, Q9FVT7
    Nucleotide Protein
    Heading Accession and Version

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