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    Mss51 MSS51 mitochondrial translational activator [ Rattus norvegicus (Norway rat) ]

    Gene ID: 289904, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Mss51provided by RGD
    Official Full Name
    MSS51 mitochondrial translational activatorprovided by RGD
    Primary source
    RGD:1309408
    See related
    EnsemblRapid:ENSRNOG00000007632 AllianceGenome:RGD:1309408
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Zmynd17
    Summary
    Predicted to enable metal ion binding activity. Orthologous to human MSS51 (MSS51 mitochondrial translational activator). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Muscle (RPKM 831.6), Thymus (RPKM 98.5) and 6 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Mss51 in Genome Data Viewer
    Location:
    15p16
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 15 NC_086033.1 (3855094..3868614)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 15 NC_051350.1 (3805240..3819385)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 15 NC_005114.4 (4240203..4252072)

    Chromosome 15 - NC_086033.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 54 Neighboring gene small nucleolar RNA SNORA68 Neighboring gene uncharacterized LOC103693236 Neighboring gene protein phosphatase 3 catalytic subunit beta Neighboring gene 60S ribosomal protein L15-like Neighboring gene uncharacterized LOC134482077 Neighboring gene annexin A7 Neighboring gene cilia and flagella associated protein 70

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. ANXA7, PPP3CB, DNAJC9, and ZMYND17 genes at chromosome 10q22 associated with the subgroup of schizophrenia with deficits in attention and executive function. Liu CM, et al. Biol Psychiatry, 2011 Jul 1. PMID 21531385

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative protein MSS51 homolog, mitochondrial
    Names
    MSS51 mitochondrial translational activator homolog
    zinc finger MYND domain-containing protein 17
    zinc finger, MYND domain containing 17
    zinc finger, MYND-type containing 17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106025.1 → NP_001099495.1  putative protein MSS51 homolog, mitochondrial

      See identical proteins and their annotated locations for NP_001099495.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474061
      UniProtKB/Swiss-Prot
      D3ZKV9
      Conserved Domains (1) summary
      pfam01753
      Location:104 → 148
      zf-MYND; MYND finger

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086033.1 Reference GRCr8

      Range
      3855094..3868614
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063274068.1 → XP_063130138.1  putative protein MSS51 homolog, mitochondrial isoform X1

      UniProtKB/Swiss-Prot
      D3ZKV9
      Related
      ENSRNOP00000010179.3, ENSRNOT00000010178.5

    2. XM_039093085.2 → XP_038949013.1  putative protein MSS51 homolog, mitochondrial isoform X2

      Conserved Domains (1) summary
      pfam01753
      Location:104 → 148
      zf-MYND; MYND finger
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    D3ZKV9.1 GenPept UniProtKB/Swiss-Prot:D3ZKV9

    Gene LinkOut

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