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    glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841407, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)
    Primary source
    TAIR:AT1G49840
    Locus tag
    AT1G49840
    See related
    Araport:AT1G49840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10F5.2; F10F5_2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (18451746..18454463)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene S-methyl-5-thioribose kinase Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene glutathione S-transferase (class phi) 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_103871.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620)
    NP_175406.1
    • Protein of unknown function (DUF620); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF620 (InterPro:IPR006873); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF620) (TAIR:AT3G19540.1); Has 212 Blast hits to 211 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 212; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18451746..18454463
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103871.4 → NP_175406.1  glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175406.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WMU0, A0A5S9WKG0, Q9C6D0
      Conserved Domains (1) summary
      pfam04788
      Location:199 → 439
      DUF620; Protein of unknown function (DUF620)
    Nucleotide Protein
    Heading Accession and Version

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