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    protein disulfide-isomerase 5-like protein (DUF1692) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841517, updated on 18-Sep-2024

    Summary

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    Official Full Name
    protein disulfide-isomerase 5-like protein (DUF1692)
    Primary source
    TAIR:AT1G50950
    Locus tag
    AT1G50950
    See related
    Araport:AT1G50950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8A12.17; F8A12_17
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    15
    Sequence:
    Chromosome: 1; NC_003070.9 (18880112..18884326)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Serine/Threonine-kinase Neighboring gene electron transfer flavoprotein alpha Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene gibberellin 2-oxidase 7 Neighboring gene Membrane trafficking VPS53 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001333460.1
    NM_103975.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    protein disulfide-isomerase 5-like protein (DUF1692)
    NP_175508.2
    • INVOLVED IN: cell redox homeostasis; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Thioredoxin domain (InterPro:IPR013766), Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: PDI-like 5-3 (TAIR:AT3G20560.1); Has 4852 Blast hits to 3459 proteins in 323 species: Archae - 0; Bacteria - 20; Metazoa - 2384; Fungi - 872; Plants - 851; Viruses - 3; Other Eukaryotes - 722 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      18880112..18884326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103975.4 → NP_175508.2  protein disulfide-isomerase 5-like protein (DUF1692) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175508.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W6Z8, A0A5S9WNL2, F4I7X9
      Conserved Domains (3) summary
      cd02961
      Location:145 → 257
      PDI_a_family; Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI ...
      pfam07970
      Location:294 → 465
      COPIIcoated_ERV; Endoplasmic reticulum vesicle transporter
      pfam13850
      Location:7 → 98
      ERGIC_N; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)

    2. NM_001333460.1 → NP_001323412.1  protein disulfide-isomerase 5-like protein (DUF1692) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W6Z8, A0A1P8AX25, A0A5S9WNL2
    Nucleotide Protein
    Heading Accession and Version

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