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    LBD32 LOB domain-containing protein 32 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828366, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LBD32
    Official Full Name
    LOB domain-containing protein 32
    Primary source
    TAIR:AT4G22700
    Locus tag
    AT4G22700
    See related
    Araport:AT4G22700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    LOB domain-containing protein 32; T12H17.90; T12H17_90
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    Genomic context

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    See LBD32 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (11933297..11933886)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene myb domain protein 85 Neighboring gene cytochrome P450, family 706, subfamily A, polypeptide 1 Neighboring gene cytochrome P450, family 706, subfamily A, polypeptide 2 Neighboring gene Actin-like ATPase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ZmMS1/ZmLBD30-orchestrated transcriptional regulatory networks precisely control pollen exine development. Hou Q, et al. Mol Plant, 2023 Aug 7. PMID 37501369
    2. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_118396.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    LOB domain-containing protein 32
    NP_194001.1
    • LOB domain-containing protein 32 (LBD32); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 35 (TAIR:AT5G35900.1); Has 784 Blast hits to 780 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 784; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      11933297..11933886
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118396.4 → NP_194001.1  LOB domain-containing protein 32 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194001.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B7XG80, O49651, Q4PSI2
      UniProtKB/TrEMBL
      A0A178UXH5, A0A5S9XUV7, A0A7G2EZH8
      Conserved Domains (1) summary
      pfam03195
      Location:5 → 101
      LOB; Lateral organ boundaries (LOB) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O49651.1

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