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    PRP3 proline-rich protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825442, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PRP3
    Official Full Name
    proline-rich protein 3
    Primary source
    TAIR:AT3G62680
    Locus tag
    AT3G62680
    See related
    Araport:AT3G62680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 3; ATPRP3; proline-rich protein 3
    Summary
    Proline-rich protein
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    Genomic context

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    See PRP3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (23182722..23184042)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene two-component response regulator Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene AtL5 Neighboring gene multidrug resistance-associated protein 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of AtPRP3, a proline-rich structural cell wall protein from Arabidopsis, is regulated by cell-type-specific developmental pathways involved in root hair formation. Bernhardt C, et al. Plant Physiol, 2000 Mar. PMID 10712533, Free PMC Article
    2. The Glycine- and Proline-Rich Protein AtGPRP3 Negatively Regulates Plant Growth in Arabidopsis. Liu X, et al. Int J Mol Sci, 2020 Aug 26. PMID 32859078, Free PMC Article
    3. Characterization and expression of four proline-rich cell wall protein genes in Arabidopsis encoding two distinct subsets of multiple domain proteins. Fowler TJ, et al. Plant Physiol, 1999 Dec. PMID 10594096, Free PMC Article
    4. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The Glycine- and Proline-Rich Protein AtGPRP3 Negatively Regulates Plant Growth in Arabidopsis.
      Title: The Glycine- and Proline-Rich Protein AtGPRP3 Negatively Regulates Plant Growth in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_116133.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular response to auxin stimulus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in cellular response to calcium ion starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in cellular response to ethylene stimulus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within trichoblast differentiation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plant-type cell wall ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    proline-rich protein 3
    NP_191827.1
    • proline-rich protein 3 (PRP3); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 1 (TAIR:AT1G54970.1); Has 50468 Blast hits to 23098 proteins in 1486 species: Archae - 263; Bacteria - 8049; Metazoa - 18736; Fungi - 5929; Plants - 9093; Viruses - 1757; Other Eukaryotes - 6641 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23182722..23184042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116133.3 → NP_191827.1  proline-rich protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191827.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LZJ7, Q9M7N9
      UniProtKB/TrEMBL
      A0A178VAB2, A0A5S9XNZ5, A0A654FK64
      Conserved Domains (1) summary
      pfam01190
      Location:188 → 270
      Pollen_Ole_e_I; Pollen proteins Ole e I like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LZJ7.1

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