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    heat-inducible transcription repressor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830706, updated on 18-Sep-2024

    Summary

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    Official Full Name
    heat-inducible transcription repressor
    Primary source
    TAIR:AT5G01970
    Locus tag
    AT5G01970
    See related
    Araport:AT5G01970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T7H20.20; T7H20_20
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (372905..375154, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2B family protein / eIF-2B family protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene RING/U-box superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene Auxin efflux carrier family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Myosin-driven transport network in plants. Kurth EG, et al. Proc Natl Acad Sci U S A, 2017 Feb 21. PMID 28096376, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001342636.1
    NM_120275.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables myosin XI tail binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in vesicle membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heat-inducible transcription repressor
    NP_195817.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      372905..375154 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120275.6 → NP_195817.1  heat-inducible transcription repressor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195817.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULD3, A0A5S9Y1D8, A0A7G2FA41, Q9LZN4

    2. NM_001342636.1 → NP_001330534.1  heat-inducible transcription repressor [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKR8, A0A1P8BB54
    Nucleotide Protein
    Heading Accession and Version

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