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    DnaJ heat shock amino-terminal domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835396, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DnaJ heat shock amino-terminal domain protein
    Primary source
    TAIR:AT5G53150
    Locus tag
    AT5G53150
    See related
    Araport:AT5G53150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MFH8.9; MFH8_9
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (21553355..21557592)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Protein phosphatase 2C family protein Neighboring gene ncRNA Neighboring gene regulatory components of ABA receptor 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis. Waidmann S, et al. Plant Cell, 2014 Nov. PMID 25387881, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001345035.1
    NM_001345038.1
    NM_001345039.1
    NM_124694.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DnaJ heat shock amino-terminal domain protein
    NP_001318793.1
    • DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05230.1); Has 19161 Blast hits to 18960 proteins in 3050 species: Archae - 127; Bacteria - 8115; Metazoa - 3268; Fungi - 1518; Plants - 2179; Viruses - 8; Other Eukaryotes - 3946 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21553355..21557592
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345036.1 → NP_001331440.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ6, Q9FGM2

    2. NM_001345037.1 → NP_001331441.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ6, Q9FGM2

    3. NM_001345035.1 → NP_001318793.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ6, Q6NMG4

    4. NM_124694.4 → NP_200127.2  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200127.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ6, Q6NMG4
      Conserved Domains (2) summary
      pfam00226
      Location:66 → 127
      DnaJ; DnaJ domain
      pfam11926
      Location:447 → 653
      DUF3444; Domain of unknown function (DUF3444)

    5. NM_001345039.1 → NP_001331442.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YDJ6, Q9FGM2

    6. NM_001345038.1 → NP_001331439.1  DnaJ heat shock amino-terminal domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BDU8
    Nucleotide Protein
    Heading Accession and Version

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