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    ATIM timeless family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835368, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATIM
    Official Full Name
    timeless family protein
    Primary source
    TAIR:AT5G52910
    Locus tag
    AT5G52910
    See related
    Araport:AT5G52910
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MXC20.14; MXC20_14; TIMELESS
    Summary
    homolog of Drosophila timeless
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    Genomic context

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    See ATIM in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    17
    Sequence:
    Chromosome: 5; NC_003076.8 (21457534..21463327, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene membrane-associated kinase regulator Neighboring gene plastidic pyruvate kinase beta subunit 1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_124669.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of circadian rhythm NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus NAS
    Non-traceable Author Statement
    more info
    		  

    General protein information

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    Preferred Names
    timeless family protein
    NP_200103.1
    • TIMELESS (ATIM); CONTAINS InterPro DOMAIN/s: Timeless C-terminal (InterPro:IPR007725), Timeless protein (InterPro:IPR006906); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21457534..21463327 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345015.1 → NP_001330129.1  timeless family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQ59, A0A1P8B9S9

    2. NM_124669.3 → NP_200103.1  timeless family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200103.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654GAY2, Q9FLX0
      Conserved Domains (2) summary
      pfam05029
      Location:688 → 1139
      TIMELESS_C; Timeless protein C terminal region
      pfam04821
      Location:39 → 297
      TIMELESS; Timeless protein
    Nucleotide Protein
    Heading Accession and Version

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