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    SPX2 SPX domain-containing protein 2 (SPX2) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817207, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SPX2
    Official Full Name
    SPX domain-containing protein 2 (SPX2)
    Primary source
    TAIR:AT2G26660
    Locus tag
    AT2G26660
    See related
    Araport:AT2G26660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA SPX DOMAIN GENE 2; ATSPX2; F18A8.3; F18A8_3; SPX domain gene 2
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    Genomic context

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    See SPX2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (11338752..11340950)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene 3-ketoacyl-CoA synthase 11 Neighboring gene K+ transporter 1 Neighboring gene Plant heme oxygenase (decyclizing) family protein Neighboring gene FkbM family methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a sub-family of Arabidopsis genes with the SPX domain reveals their diverse functions in plant tolerance to phosphorus starvation. Duan K, et al. Plant J, 2008 Jun. PMID 18315545
    2. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. Lee TA, et al. Plant Cell, 2019 Nov. PMID 31519798, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_128223.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
    acts_upstream_of_or_within cellular response to phosphate starvation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SPX domain-containing protein 2 (SPX2)
    NP_180234.1
    • SPX domain gene 2 (SPX2); CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331); BEST Arabidopsis thaliana protein match is: SPX domain gene 1 (TAIR:AT5G20150.1); Has 1206 Blast hits to 1202 proteins in 209 species: Archae - 0; Bacteria - 6; Metazoa - 245; Fungi - 512; Plants - 320; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11338752..11340950
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128223.3 → NP_180234.1  SPX domain-containing protein 2 (SPX2) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180234.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48781, Q8GWZ3
      UniProtKB/TrEMBL
      A0A178VUZ6, A0A5S9X1N0
      Conserved Domains (1) summary
      cd14481
      Location:2 → 151
      SPX_AtSPX1_like; SPX domain of the plant protein SPX1 and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O48781.1

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