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    Plant invertase/pectin methylesterase inhibitor superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819380, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Plant invertase/pectin methylesterase inhibitor superfamily protein
    Primary source
    TAIR:AT2G47670
    Locus tag
    AT2G47670
    See related
    Araport:AT2G47670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17A22.6; PECTIN METHYLESTERASE INHIBITOR 6; PMEI6
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (19543921..19544910, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene UDP-xylose synthase 4 Neighboring gene zinc finger (CCCH type) helicase family protein Neighboring gene NADH-ubiquinone oxidoreductase-like protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Stomatal Function Requires Pectin De-methyl-esterification of the Guard Cell Wall. Amsbury S, et al. Curr Biol, 2016 Nov 7. PMID 27720618, Free PMC Article
    2. Pectin Demethylesterification Generates Platforms that Anchor Peroxidases to Remodel Plant Cell Wall Domains. Francoz E, et al. Dev Cell, 2019 Jan 28. PMID 30555001
    3. The Developmental Regulator SEEDSTICK Controls Structural and Mechanical Properties of the Arabidopsis Seed Coat. Ezquer I, et al. Plant Cell, 2016 Oct. PMID 27624758, Free PMC Article
    4. PECTIN METHYLESTERASE INHIBITOR6 promotes Arabidopsis mucilage release by limiting methylesterification of homogalacturonan in seed coat epidermal cells. Saez-Aguayo S, et al. Plant Cell, 2013 Jan. PMID 23362209, Free PMC Article
    5. The Genetic Control of SEEDSTICK and LEUNIG-HOMOLOG in Seed and Fruit Development: New Insights into Cell Wall Control. Di Marzo M, et al. Plants (Basel), 2022 Nov 17. PMID 36432874, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_130335.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables pectinesterase inhibitor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within mucilage metabolic process involved in seed coat development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in mucilage pectin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of catalytic activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within plant-type cell wall modification IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in seed coat development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within seed coat development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Plant invertase/pectin methylesterase inhibitor superfamily protein
    NP_182289.1
    • Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT3G62820.1); Has 822 Blast hits to 815 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 822; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19543921..19544910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130335.3 → NP_182289.1  Plant invertase/pectin methylesterase inhibitor superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182289.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22244, Q8LCK2
      UniProtKB/TrEMBL
      A0A654F2U5
      Conserved Domains (1) summary
      smart00856
      Location:43 → 199
      PMEI; Plant invertase/pectin methylesterase inhibitor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O22244.1

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