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    MAN2 Glycosyl hydrolase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816596, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MAN2
    Official Full Name
    Glycosyl hydrolase superfamily protein
    Primary source
    TAIR:AT2G20680
    Locus tag
    AT2G20680
    See related
    Araport:AT2G20680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtMAN2; endo-beta-mannase 2; F5H14.35; F5H14_35
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    Genomic context

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    See MAN2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (8920447..8923227)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ralf-like 14 Neighboring gene sugar phosphate exchanger, putative (DUF506) Neighboring gene lumazine-binding family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene LORELEI-LIKE-GPI ANCHORED PROTEIN 2 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Biochemical characterization of the novel endo-β-mannanase AtMan5-2 from Arabidopsis thaliana. Wang Y, et al. Plant Sci, 2015 Dec. PMID 26706067
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtMan5-2 may play a role in glucomannan regulation in the stem and seed coat mucilage. [Man5-2]
      Title: Biochemical characterization of the novel endo-β-mannanase AtMan5-2 from Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_127632.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mannan endo-1,4-beta-mannosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within mannan metabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Glycosyl hydrolase superfamily protein
    NP_179660.2
    • Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 5 (InterPro:IPR001547), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G28320.1); Has 827 Blast hits to 815 proteins in 205 species: Archae - 18; Bacteria - 244; Metazoa - 38; Fungi - 187; Plants - 310; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8920447..8923227
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127632.3 → NP_179660.2  Glycosyl hydrolase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179660.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7Y223, Q9SKU9
      UniProtKB/TrEMBL
      A0A5S9WZU0, A0A654EVU2
      Conserved Domains (1) summary
      cl23725
      Location:53 → 340
      Glyco_hydro_1; Glycosyl hydrolase family 1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7Y223.1

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