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    hypothetical protein (DUF626) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816588, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF626)
    Primary source
    TAIR:AT2G20620
    Locus tag
    AT2G20620
    See related
    Araport:AT2G20620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23N11.6; F23N11_6
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (8891920..8893244, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Plant thionin family protein Neighboring gene Plant thionin family protein Neighboring gene ncRNA Neighboring gene hypothetical protein (DUF626) Neighboring gene PP2C induced by AVRRPM1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_127625.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF626)
    NP_179653.1
    • Protein of unknown function (DUF626); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT4G29550.1); Has 165 Blast hits to 165 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8891920..8893244 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127625.2 → NP_179653.1  hypothetical protein (DUF626) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179653.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q84X35, Q84X36, Q9SIU9
      UniProtKB/TrEMBL
      A0A5S9WZM5, A0A654EUM2
      Conserved Domains (1) summary
      pfam04776
      Location:168 → 277
      DUF626; Protein of unknown function (DUF626)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SIU9.1

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