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    TPS7 trehalose-phosphatase/synthase 7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837152, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TPS7
    Official Full Name
    trehalose-phosphatase/synthase 7
    Primary source
    TAIR:AT1G06410
    Locus tag
    AT1G06410
    See related
    Araport:AT1G06410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATTPS7; ATTPSA; T2D23.11; T2D23_11; TREHALOSE -6-PHOSPHATASE SYNTHASE S7; trehalose-phosphatase/synthase 7
    Summary
    Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.
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    Genomic context

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    See TPS7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (1954674..1958866)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GSK3/SHAGGY-like protein kinase 1 Neighboring gene Ras-related small GTP-binding family protein Neighboring gene ncRNA Neighboring gene DNA ligase-like protein Neighboring gene FTSH protease 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Trehalose metabolism in Arabidopsis: occurrence of trehalose and molecular cloning and characterization of trehalose-6-phosphate synthase homologues. Vogel G, et al. J Exp Bot, 2001 Sep. PMID 11520870
    2. Extensive expression regulation and lack of heterologous enzymatic activity of the Class II trehalose metabolism proteins from Arabidopsis thaliana. Ramon M, et al. Plant Cell Environ, 2009 Aug. PMID 19344332
    3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001331626.1
    NM_001331627.1
    NM_100521.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    NOT enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    NOT enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    NOT enables trehalose-phosphatase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    NOT enables trehalose-phosphatase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in trehalose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    trehalose-phosphatase/synthase 7
    NP_172129.1
    • trehalose-phosphatase/synthase 7 (TPS7); FUNCTIONS IN: transferase activity, transferring glycosyl groups, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Glycosyl transferase, family 20 (InterPro:IPR001830), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: trehalose phosphatase/synthase 5 (TAIR:AT4G17770.1); Has 4234 Blast hits to 4163 proteins in 1008 species: Archae - 52; Bacteria - 2285; Metazoa - 161; Fungi - 658; Plants - 607; Viruses - 0; Other Eukaryotes - 471 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1954674..1958866
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100521.3 → NP_172129.1  trehalose-phosphatase/synthase 7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172129.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WPW3, Q9LMI0
      UniProtKB/TrEMBL
      A0A178WH64, A0A5S9SXH1
      Conserved Domains (1) summary
      PLN02205
      Location:1 → 838
      PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]

    2. NM_001331626.1 → NP_001321476.1  trehalose-phosphatase/synthase 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WPW3, Q9LMI0
      UniProtKB/TrEMBL
      A0A178WH64, A0A5S9SXH1
      Conserved Domains (1) summary
      PLN02205
      Location:1 → 838
      PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]

    3. NM_001331627.1 → NP_001321475.1  trehalose-phosphatase/synthase 7 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WPW3, Q9LMI0
      UniProtKB/TrEMBL
      A0A178WH64, A0A5S9SXH1
      Conserved Domains (1) summary
      PLN02205
      Location:1 → 838
      PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LMI0.1

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