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    RABA1g RAB GTPase homolog A1G [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820735, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RABA1g
    Official Full Name
    RAB GTPase homolog A1G
    Primary source
    TAIR:AT3G15060
    Locus tag
    AT3G15060
    See related
    Araport:AT3G15060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRABA1g; RAB GTPase homolog A1G
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    Genomic context

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    See RABA1g in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (5069104..5070540)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene IQ-domain 10 Neighboring gene tRNA-Ile Neighboring gene RING/U-box superfamily protein Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene GroES-like zinc-binding alcohol dehydrogenase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Null mutants of individual RABA genes impact the proportion of different cell wall components in stem tissue of Arabidopsis thaliana. Lunn D, et al. PLoS One, 2013. PMID 24124508, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_112368.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell wall biogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RAB GTPase homolog A1G
    NP_188124.1
    • RAB GTPase homolog A1G (RABA1g); FUNCTIONS IN: GTP binding; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27884 Blast hits to 27831 proteins in 751 species: Archae - 32; Bacteria - 137; Metazoa - 14654; Fungi - 4198; Plants - 2964; Viruses - 20; Other Eukaryotes - 5879 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5069104..5070540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112368.4 → NP_188124.1  RAB GTPase homolog A1G [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188124.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LK99
      UniProtKB/TrEMBL
      A0A178VIU7, A0A5S9XCL9, A0A7G2FLV4
      Conserved Domains (1) summary
      cd01868
      Location:11 → 175
      Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LK99.1

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