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    myosin heavy chain-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830682, updated on 18-Sep-2024

    Summary

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    Official Full Name
    myosin heavy chain-like protein
    Primary source
    TAIR:AT5G07890
    Locus tag
    AT5G07890
    See related
    Araport:AT5G07890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13G24.90
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (2517306..2520041, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene synaptosomal-associated protein SNAP25-like 29 Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene ncRNA Neighboring gene Leucine-rich repeat (LRR) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Arabidopsis nuclear proteome and its response to cold stress. Bae MS, et al. Plant J, 2003 Dec. PMID 14617066
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001036773.2
    NM_001036774.2
    NM_001342965.1
    NM_001342966.1
    NM_120871.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    myosin heavy chain-like protein
    NP_001031850.1
    • myosin heavy chain-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61200.3); Has 30209 Blast hits to 18141 proteins in 1301 species: Archae - 452; Bacteria - 2879; Metazoa - 15591; Fungi - 2095; Plants - 1254; Viruses - 66; Other Eukaryotes - 7872 (source: NCBI BLink).
    NP_001318504.1
    • myosin heavy chain-related; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61200.3); Has 43004 Blast hits to 25312 proteins in 1567 species: Archae - 608; Bacteria - 4434; Metazoa - 22456; Fungi - 2945; Plants - 1841; Viruses - 100; Other Eukaryotes - 10620 (source: NCBI BLink).
    NP_196406.2
    • myosin heavy chain-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61200.3); Has 43004 Blast hits to 25312 proteins in 1567 species: Archae - 608; Bacteria - 4434; Metazoa - 22456; Fungi - 2945; Plants - 1841; Viruses - 100; Other Eukaryotes - 10620 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2517306..2520041 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120871.3 → NP_196406.2  myosin heavy chain-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196406.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UPB3, A0A384KXX4, A0A654FZF9, B9DG86
      Conserved Domains (1) summary
      COG1196
      Location:29 → 397
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_001036773.2 → NP_001031850.1  myosin heavy chain-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031850.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K867, Q9SD95
      Conserved Domains (1) summary
      COG1196
      Location:3 → 312
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. NM_001342966.1 → NP_001332408.1  myosin heavy chain-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UPB3, A0A384KXX4, A0A654FZF9, B9DG86
      Conserved Domains (1) summary
      COG1196
      Location:29 → 397
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    4. NM_001342965.1 → NP_001318504.1  myosin heavy chain-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UPB3, A0A384KXX4, A0A654FZF9, B9DG86
      Conserved Domains (1) summary
      COG1196
      Location:29 → 397
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    5. NM_001036774.2 → NP_001031851.1  myosin heavy chain-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031851.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UPB3, A0A384KXX4, A0A654FZF9, B9DG86
      Conserved Domains (1) summary
      COG1196
      Location:29 → 397
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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