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    AIG2L avirulence induced protein 2 like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833968, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AIG2L
    Official Full Name
    avirulence induced protein 2 like protein
    Primary source
    TAIR:AT5G39720
    Locus tag
    AT5G39720
    See related
    Araport:AT5G39720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    avirulence induced gene 2 like protein; MKM21.1
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    Genomic context

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    See AIG2L in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (15899618..15900667)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene lysine histidine transporter-like protein Neighboring gene AIG2-like (avirulence induced gene) family protein Neighboring gene ribosomal protein L5 B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Solution structure of Arabidopsis thaliana protein At5g39720.1, a member of the AIG2-like protein family. Lytle BL, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2006 Jun 1. PMID 16754964, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123334.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    avirulence induced protein 2 like protein
    NP_198788.1
    • avirulence induced gene 2 like protein (AIG2L); CONTAINS InterPro DOMAIN/s: Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like (InterPro:IPR009288); BEST Arabidopsis thaliana protein match is: AIG2-like (avirulence induced gene) family protein (TAIR:AT5G39730.1); Has 287 Blast hits to 287 proteins in 90 species: Archae - 12; Bacteria - 68; Metazoa - 0; Fungi - 56; Plants - 104; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      15899618..15900667
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344301.1 → NP_001330763.1  avirulence induced protein 2 like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBU1

    2. NM_123334.3 → NP_198788.1  avirulence induced protein 2 like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198788.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q58CN3, Q680A3, Q9FIX2
      UniProtKB/TrEMBL
      A0A178USH4, A0A5S9Y9D4, A0A654G6E7, A2RVP6
      Conserved Domains (1) summary
      pfam06094
      Location:12 → 124
      GGACT; Gamma-glutamyl cyclotransferase, AIG2-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FIX2.1

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