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    PSRP3/2 Ribosomal protein PSRP-3/Ycf65 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831432, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PSRP3/2
    Official Full Name
    Ribosomal protein PSRP-3/Ycf65
    Primary source
    TAIR:AT5G15760
    Locus tag
    AT5G15760
    See related
    Araport:AT5G15760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14F8.140; F14F8_140; plastid-specific ribosomal protein 3/2
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    Genomic context

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    See PSRP3/2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (5142990..5144606)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene O-fucosyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene Alpha-L RNA-binding motif/Ribosomal protein S4 family protein Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene glucose-6-phosphate acetyltransferase 1 Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121581.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein PSRP-3/Ycf65
    NP_197080.1
    • Ribosomal protein PSRP-3/Ycf65; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, chloroplast, plastid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein PSRP-3/Ycf65 (InterPro:IPR006924); BEST Arabidopsis thaliana protein match is: Ribosomal protein PSRP-3/Ycf65 (TAIR:AT1G68590.1); Has 388 Blast hits to 388 proteins in 107 species: Archae - 0; Bacteria - 133; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5142990..5144606
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121581.3 → NP_197080.1  Ribosomal protein PSRP-3/Ycf65 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197080.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LFV0
      UniProtKB/TrEMBL
      A0A178UH96, A0A5S9Y5A2, A0A654G1C5
      Conserved Domains (1) summary
      cl04793
      Location:102 → 179
      PSRP-3_Ycf65; Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LFV0.1

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